Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acetyltransferase | HSERO_RS01180 | Not Available | Positive | 244668 - 245843 | 40425.1 |
| transporter substrate-binding domain-containing protein | HSERO_RS01185 | Not Available | Negative | 245979 - 246788 | 29207.6 |
| amino acid abc transporter atp-binding protein | HSERO_RS01190 | Not Available | Negative | 246845 - 247573 | 26086.8 |
| amino acid abc transporter permease | HSERO_RS01195 | Not Available | Negative | 247557 - 248204 | 23410.2 |
| amino acid abc transporter permease | HSERO_RS01200 | Not Available | Negative | 248217 - 248900 | 24739.7 |
| alpha-hydroxy acid oxidase | HSERO_RS01205 | Not Available | Negative | 248933 - 250114 | 42727.6 |
| fadr/gntr family transcriptional regulator | HSERO_RS01210 | Not Available | Positive | 250366 - 251085 | 26761.2 |
| tetratricopeptide repeat protein | HSERO_RS01215 | Not Available | Negative | 251082 - 252728 | 60963.0 |
| phospholipase d-like domain-containing protein | HSERO_RS24590 | Not Available | Negative | 252738 - 253406 | 25039.6 |
| tetratricopeptide repeat protein | HSERO_RS01225 | Not Available | Negative | 253437 - 255032 | 59230.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


