Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | HSERO_RS14695 | Not Available | Positive | 3331440 - 3332321 | 30765.4 |
| branched-chain amino acid abc transporter permease | HSERO_RS14700 | Not Available | Positive | 3332323 - 3333198 | 31287.3 |
| abc transporter atp-binding protein | HSERO_RS14705 | Not Available | Positive | 3333198 - 3333959 | 28181.4 |
| abc transporter atp-binding protein | HSERO_RS14710 | Not Available | Positive | 3333956 - 3334687 | 25798.6 |
| Trna-leu | Not Available | Not Available | Positive | 3334822 - 3334906 | Not Available |
| alpha/beta hydrolase domain-containing protein | HSERO_RS14720 | Not Available | Positive | 3335185 - 3337404 | 78961.2 |
| penicillin-binding protein 1c | HSERO_RS14725 | Not Available | Negative | 3337452 - 3339713 | 82387.6 |
| mg2 domain-containing protein | HSERO_RS14730 | Not Available | Negative | 3339719 - 3345535 | 210454.0 |
| lysr family transcriptional regulator | HSERO_RS14735 | Not Available | Negative | 3345729 - 3346610 | 32465.8 |
| mfs transporter | HSERO_RS14740 | Not Available | Positive | 3346753 - 3347940 | 40087.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


