Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic diphosphatase | HSERO_RS14645 | Not Available | Negative | 3317463 - 3317996 | 19890.0 |
| heme biosynthesis protein hemy | HSERO_RS14650 | Not Available | Negative | 3318236 - 3319435 | 44899.2 |
| uroporphyrinogen-iii c-methyltransferase | HSERO_RS14655 | Not Available | Negative | 3319456 - 3320661 | 43984.1 |
| uroporphyrinogen-iii synthase | HSERO_RS14660 | Not Available | Negative | 3320694 - 3321503 | 28798.8 |
| hydroxymethylbilane synthase | HSERO_RS14665 | Not Available | Negative | 3321487 - 3322443 | 33818.8 |
| phosphoenolpyruvate carboxylase | HSERO_RS14670 | Not Available | Positive | 3322666 - 3325578 | 107910.0 |
| dienelactone hydrolase family protein | HSERO_RS14675 | Not Available | Positive | 3326261 - 3326929 | 24513.2 |
| hdod domain-containing protein | HSERO_RS14680 | Not Available | Negative | 3327028 - 3327852 | 30487.8 |
| argininosuccinate lyase | HSERO_RS14685 | Not Available | Positive | 3328317 - 3329711 | 51112.5 |
| abc transporter substrate-binding protein | HSERO_RS14690 | Not Available | Positive | 3330174 - 3331331 | 40370.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


