Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | HSERO_RS24175 | Not Available | Negative | 3305230 - 3306333 | 42239.0 |
| hypothetical protein | HSERO_RS14605 | Not Available | Positive | 3307064 - 3307255 | 7118.8 |
| duf4440 domain-containing protein | HSERO_RS14610 | Not Available | Positive | 3307305 - 3307802 | 18156.6 |
| hypothetical protein | HSERO_RS14615 | Not Available | Negative | 3307969 - 3308823 | 32176.6 |
| duf2515 family protein | HSERO_RS25425 | Not Available | Negative | 3308834 - 3309010 | 6692.18 |
| methyl-accepting chemotaxis protein | HSERO_RS14620 | Not Available | Negative | 3309047 - 3310648 | 56995.1 |
| methyl-accepting chemotaxis protein | HSERO_RS14625 | Not Available | Negative | 3310806 - 3312413 | 56214.9 |
| gnat family n-acetyltransferase | HSERO_RS14630 | Not Available | Negative | 3312723 - 3313181 | 17398.8 |
| duf3300 domain-containing protein | HSERO_RS14635 | Not Available | Positive | 3313582 - 3315117 | 59296.9 |
| peptide chain release factor 3 | HSERO_RS14640 | Not Available | Positive | 3315347 - 3317035 | 62226.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


