Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | HSERO_RS14445 | Not Available | Negative | 3271086 - 3272540 | 51905.7 |
| hlyd family type i secretion periplasmic adaptor subunit | HSERO_RS14450 | Not Available | Negative | 3272530 - 3273873 | 49911.6 |
| type i secretion system permease/atpase | HSERO_RS14455 | Not Available | Negative | 3273870 - 3276050 | 79852.7 |
| calcium-binding protein | HSERO_RS14460 | Not Available | Negative | 3276165 - 3279584 | 116405.0 |
| porin | HSERO_RS14465 | Not Available | Negative | 3280005 - 3281144 | 39405.3 |
| mlae family abc transporter permease | HSERO_RS14470 | Not Available | Positive | 3281384 - 3282526 | 40398.2 |
| abc transporter atp-binding protein | HSERO_RS14475 | Not Available | Positive | 3282520 - 3283356 | 29528.8 |
| mlad family protein | HSERO_RS14480 | Not Available | Positive | 3283356 - 3284273 | 32244.5 |
| abc-type transport auxiliary lipoprotein family protein | HSERO_RS14485 | Not Available | Positive | 3284270 - 3284884 | 22240.6 |
| lysr family transcriptional regulator | HSERO_RS14490 | Not Available | Positive | 3285002 - 3285928 | 34212.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


