Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nif-specific transcriptional activator nifa | HSERO_RS14390 | Not Available | Negative | 3257955 - 3259583 | 60810.9 |
| hypothetical protein | HSERO_RS24805 | Not Available | Positive | 3259739 - 3260194 | 16676.1 |
| oxygen-binding protein | HSERO_RS14395 | Not Available | Positive | 3260253 - 3260699 | 17112.6 |
| llm class flavin-dependent oxidoreductase | HSERO_RS14400 | Not Available | Positive | 3260788 - 3261789 | 36265.5 |
| tobe domain-containing protein | HSERO_RS14405 | Not Available | Positive | 3261786 - 3262595 | 28285.3 |
| voc family protein | HSERO_RS14410 | Not Available | Negative | 3262880 - 3263266 | 14403.6 |
| h-ns family nucleoid-associated regulatory protein | HSERO_RS14415 | Not Available | Negative | 3263627 - 3263971 | 12786.4 |
| calcium-binding protein | HSERO_RS24160 | Not Available | Negative | 3264380 - 3267151 | 95879.3 |
| hypothetical protein | HSERO_RS14425 | Not Available | Positive | 3267133 - 3267726 | 20327.8 |
| calcium-binding protein | HSERO_RS24810 | Not Available | Negative | 3267797 - 3270619 | 97783.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


