Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | HSERO_RS00975 | Not Available | Positive | 208578 - 209972 | 52357.7 |
| fmdb family zinc ribbon protein | HSERO_RS00980 | Not Available | Positive | 210152 - 210508 | 11474.3 |
| duf502 domain-containing protein | HSERO_RS00985 | Not Available | Positive | 210527 - 211162 | 23139.8 |
| aspartate--trna ligase | HSERO_RS00990 | Not Available | Positive | 211261 - 213066 | 67522.9 |
| hypothetical protein | HSERO_RS00995 | Not Available | Negative | 213343 - 213936 | 21740.5 |
| gp53-like domain-containing protein | HSERO_RS24060 | Not Available | Negative | 213946 - 215382 | 48797.8 |
| phage tail protein i | HSERO_RS24065 | Not Available | Negative | 215551 - 216300 | 26683.3 |
| dihydroneopterin triphosphate diphosphatase | HSERO_RS01165 | Not Available | Positive | 242009 - 242512 | 18983.4 |
| endonuclease/exonuclease/phosphatase family protein | HSERO_RS01170 | Not Available | Positive | 242567 - 243364 | 29575.4 |
| phospholipase d-like domain-containing protein | HSERO_RS01175 | Not Available | Positive | 243367 - 244530 | 43544.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


