Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | HSERO_RS14140 | Not Available | Negative | 3215818 - 3218208 | 85168.1 |
| lrp/asnc family transcriptional regulator | HSERO_RS14145 | Not Available | Negative | 3218624 - 3219085 | 17455.3 |
| sigma-70 family rna polymerase sigma factor | HSERO_RS14150 | Not Available | Positive | 3219546 - 3220121 | 21470.7 |
| fecr family protein | HSERO_RS14155 | Not Available | Positive | 3220140 - 3221066 | 33106.5 |
| plp-dependent aminotransferase family protein | HSERO_RS14160 | Not Available | Positive | 3221243 - 3222718 | 53641.4 |
| hypothetical protein | HSERO_RS14165 | Not Available | Negative | 3222761 - 3223660 | 32208.4 |
| thioredoxin | HSERO_RS14170 | Not Available | Negative | 3223664 - 3223996 | 12399.0 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | HSERO_RS14175 | Not Available | Negative | 3224427 - 3224738 | 11535.2 |
| iscs subfamily cysteine desulfurase | HSERO_RS14180 | Not Available | Positive | 3225255 - 3226475 | 44381.3 |
| fe-s cluster assembly scaffold iscu | HSERO_RS14185 | Not Available | Positive | 3226489 - 3226938 | 15944.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


