Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HSERO_RS13960 | Not Available | Positive | 3175950 - 3176981 | 37934.4 |
| single-stranded-dna-specific exonuclease recj | HSERO_RS13965 | Not Available | Positive | 3176978 - 3178672 | 61836.3 |
| diguanylate cyclase domain-containing protein | HSERO_RS13970 | Not Available | Positive | 3178869 - 3180554 | 60772.2 |
| hypothetical protein | HSERO_RS13975 | Not Available | Negative | 3180496 - 3181221 | 26843.4 |
| phox family protein | HSERO_RS13980 | Not Available | Negative | 3181326 - 3183281 | 69179.0 |
| peptide chain release factor 2 | HSERO_RS13990 | Not Available | Positive | 3183458 - 3184562 | 41772.0 |
| lysine--trna ligase | HSERO_RS13995 | Not Available | Positive | 3184639 - 3186180 | 57337.7 |
| glycine zipper 2tm domain-containing protein | HSERO_RS14000 | Not Available | Positive | 3186460 - 3187071 | 20421.3 |
| alpha/beta hydrolase | HSERO_RS14005 | Not Available | Positive | 3187457 - 3188368 | 33957.9 |
| duf4118 domain-containing protein | HSERO_RS14010 | Not Available | Positive | 3188507 - 3188992 | 18554.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


