Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | HSERO_RS13805 | Not Available | Positive | 3139072 - 3140247 | 42760.5 |
| polysaccharide deacetylase family protein | HSERO_RS13810 | Not Available | Positive | 3140251 - 3141312 | 38907.2 |
| glycosyltransferase | HSERO_RS13815 | Not Available | Positive | 3141318 - 3142604 | 48137.4 |
| lipopolysaccharide biosynthesis protein | HSERO_RS13820 | Not Available | Positive | 3142601 - 3144115 | 53877.9 |
| xrta/pep-cterm system tpr-repeat protein prst | HSERO_RS13825 | Not Available | Positive | 3144249 - 3147023 | 98756.8 |
| acyl carrier protein | HSERO_RS13830 | Not Available | Positive | 3147032 - 3147283 | 9051.78 |
| hydrolase 2, exosortase a system-associated | HSERO_RS13835 | Not Available | Positive | 3147280 - 3148125 | 29761.2 |
| hydrolase 1, exosortase a system-associated | HSERO_RS13840 | Not Available | Positive | 3148115 - 3148972 | 31334.9 |
| choice-of-anchor e domain-containing protein | HSERO_RS13845 | Not Available | Negative | 3149071 - 3149754 | 23725.7 |
| choice-of-anchor e domain-containing protein | HSERO_RS13850 | Not Available | Negative | 3149994 - 3150695 | 23978.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


