Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03016 family pep-cterm system-associated outer membrane protein | HSERO_RS13755 | Not Available | Positive | 3126294 - 3127820 | 54352.9 |
| xrta/pep-cterm system-associated atpase | HSERO_RS13760 | Not Available | Positive | 3127833 - 3128840 | 37804.2 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | HSERO_RS13765 | Not Available | Positive | 3128837 - 3129973 | 41322.1 |
| xrta system polysaccharide deacetylase | HSERO_RS13770 | Not Available | Positive | 3129994 - 3130839 | 32372.2 |
| femab family xrta/pep-cterm system-associated protein | HSERO_RS13775 | Not Available | Positive | 3130836 - 3131912 | 40467.2 |
| tigr03087 family pep-cterm/xrta system glycosyltransferase | HSERO_RS13780 | Not Available | Positive | 3131916 - 3133145 | 45719.0 |
| exosortase a | HSERO_RS13785 | Not Available | Positive | 3133148 - 3134710 | 57314.9 |
| tigr03088 family pep-cterm/xrta system glycosyltransferase | HSERO_RS13790 | Not Available | Positive | 3134718 - 3135884 | 42530.1 |
| xrta/pep-cterm system amidotransferase | HSERO_RS13795 | Not Available | Positive | 3135890 - 3137833 | 72586.3 |
| tigr04063 family pep-cterm/xrta system glycosyltransferase | HSERO_RS13800 | Not Available | Positive | 3137855 - 3139075 | 44151.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


