Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | HSERO_RS00930 | Not Available | Positive | 196282 - 197823 | 56712.4 |
| tonb-dependent receptor | HSERO_RS00935 | Not Available | Negative | 197841 - 199955 | 76438.7 |
| type ii secretion system major pseudopilin gspg | HSERO_RS00940 | Not Available | Negative | 200180 - 200647 | 17387.7 |
| iron donor protein cyay | HSERO_RS00945 | Not Available | Negative | 200757 - 201089 | 11998.9 |
| lps translocon maturation chaperone lptm | HSERO_RS24055 | Not Available | Positive | 201139 - 201369 | 7807.41 |
| diaminopimelate decarboxylase | HSERO_RS00950 | Not Available | Positive | 201429 - 202721 | 46242.4 |
| hypothetical protein | HSERO_RS00955 | Not Available | Positive | 203037 - 203966 | 31906.2 |
| sodium:solute symporter family protein | HSERO_RS00960 | Not Available | Positive | 204200 - 205657 | 52851.0 |
| trehalose-phosphatase | HSERO_RS00965 | Not Available | Positive | 205855 - 206601 | 26805.4 |
| glycoside hydrolase family 15 protein | HSERO_RS00970 | Not Available | Positive | 206689 - 208578 | 71462.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


