Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xrta/pep-cterm system histidine kinase prsk | HSERO_RS13705 | Not Available | Negative | 3112682 - 3114802 | 78403.9 |
| tigr03013 family xrta/pep-cterm system glycosyltransferase | HSERO_RS13710 | Not Available | Negative | 3114814 - 3116199 | 51984.3 |
| pep-cterm sorting domain-containing protein | HSERO_RS13715 | Not Available | Positive | 3116760 - 3117383 | 21441.1 |
| ydcf family protein | HSERO_RS13720 | Not Available | Positive | 3117515 - 3118318 | 29333.0 |
| chondroitinase-b domain-containing protein | HSERO_RS13725 | Not Available | Positive | 3118315 - 3119751 | 50747.5 |
| nucleotide sugar dehydrogenase | HSERO_RS13730 | Not Available | Positive | 3119834 - 3121114 | 46242.5 |
| sdr family oxidoreductase | HSERO_RS13735 | Not Available | Positive | 3121140 - 3122183 | 38349.5 |
| gnat family n-acetyltransferase | HSERO_RS24155 | Not Available | Positive | 3122195 - 3123328 | 42263.1 |
| xrta system polysaccharide chain length determinant | HSERO_RS13745 | Not Available | Positive | 3123691 - 3125205 | 56039.9 |
| xrta-associated tyrosine autokinase | HSERO_RS13750 | Not Available | Positive | 3125270 - 3126310 | 37017.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


