Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupredoxin domain-containing protein | HSERO_RS13655 | Not Available | Negative | 3100690 - 3101031 | 12277.2 |
| iron transporter | HSERO_RS13660 | Not Available | Negative | 3101159 - 3101704 | 19729.8 |
| methyl-accepting chemotaxis protein | HSERO_RS13665 | Not Available | Negative | 3101951 - 3103597 | 58384.7 |
| patatin-like phospholipase family protein | HSERO_RS13670 | Not Available | Negative | 3103653 - 3104765 | 40651.8 |
| response regulator | HSERO_RS13675 | Not Available | Positive | 3105196 - 3105597 | 14732.7 |
| methyl-accepting chemotaxis protein | HSERO_RS13680 | Not Available | Positive | 3105827 - 3107566 | 61771.3 |
| s1 family peptidase | HSERO_RS13685 | Not Available | Negative | 3107692 - 3108462 | 26629.5 |
| pyridoxal-dependent decarboxylase, exosortase a system-associated | HSERO_RS13690 | Not Available | Negative | 3108459 - 3109715 | 44079.9 |
| acyl-coa ligase (amp-forming), exosortase a system-associated | HSERO_RS13695 | Not Available | Negative | 3109705 - 3111324 | 57252.1 |
| pep-cterm-box response regulator transcription factor | HSERO_RS13700 | Not Available | Negative | 3111333 - 3112685 | 49579.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


