Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paar domain-containing protein | HSERO_RS24410 | Not Available | Negative | 3087529 - 3088050 | 18255.7 |
| s-formylglutathione hydrolase | HSERO_RS13610 | Not Available | Negative | 3088310 - 3089158 | 31100.9 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | HSERO_RS13615 | Not Available | Negative | 3089169 - 3090275 | 39337.7 |
| eal domain-containing protein | HSERO_RS13620 | Not Available | Positive | 3090893 - 3094075 | 119898.0 |
| mfs transporter | HSERO_RS13625 | Not Available | Negative | 3094118 - 3095389 | 43712.2 |
| nadp(h)-dependent aldo-keto reductase | HSERO_RS13630 | Not Available | Positive | 3095586 - 3096635 | 38815.2 |
| bile acid:sodium symporter family protein | HSERO_RS13635 | Not Available | Negative | 3096743 - 3097750 | 35989.2 |
| zinc ribbon domain-containing protein yjdm | HSERO_RS13640 | Not Available | Negative | 3097865 - 3098203 | 12065.3 |
| 4fe-4s binding protein | HSERO_RS13645 | Not Available | Negative | 3098376 - 3099713 | 49984.0 |
| ftr1 family iron permease | HSERO_RS13650 | Not Available | Negative | 3099772 - 3100644 | 31637.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


