Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| delta(1)-pyrroline-2-carboxylate reductase family protein | HSERO_RS00880 | Not Available | Positive | 182962 - 183900 | 32883.9 |
| branched-chain amino acid abc transporter permease | HSERO_RS00885 | Not Available | Positive | 184042 - 184971 | 32248.2 |
| abc transporter permease subunit | HSERO_RS00890 | Not Available | Positive | 185026 - 186240 | 43302.1 |
| abc transporter atp-binding protein | HSERO_RS00895 | Not Available | Positive | 186256 - 187023 | 27837.9 |
| abc transporter atp-binding protein | HSERO_RS00900 | Not Available | Positive | 187220 - 187945 | 25986.0 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | HSERO_RS00905 | Not Available | Positive | 188203 - 191895 | 133545.0 |
| atp-dependent protease subunit hslv | HSERO_RS00910 | Not Available | Positive | 192094 - 192630 | 19219.3 |
| atp-dependent protease atpase subunit hslu | HSERO_RS00915 | Not Available | Positive | 192695 - 194041 | 50137.3 |
| hypothetical protein | HSERO_RS00920 | Not Available | Positive | 194064 - 194267 | 7354.78 |
| porin | HSERO_RS00925 | Not Available | Positive | 194590 - 195762 | 40156.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


