Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | HSERO_RS13195 | Not Available | Positive | 3006228 - 3009665 | 125918.0 |
| response regulator transcription factor | HSERO_RS13200 | Not Available | Positive | 3009643 - 3010599 | 34527.1 |
| fad-dependent oxidoreductase | HSERO_RS13205 | Not Available | Negative | 3010647 - 3011870 | 44696.9 |
| hypothetical protein | HSERO_RS13210 | Not Available | Negative | 3011857 - 3012063 | 6779.42 |
| tonb-dependent receptor | HSERO_RS13215 | Not Available | Negative | 3012141 - 3014252 | 76373.4 |
| helix-turn-helix transcriptional regulator | HSERO_RS13220 | Not Available | Positive | 3014368 - 3015336 | 35006.4 |
| hypothetical protein | HSERO_RS13225 | Not Available | Positive | 3015403 - 3015600 | 7439.65 |
| cobyric acid synthase | HSERO_RS13230 | Not Available | Negative | 3015683 - 3017152 | 52232.8 |
| threonine-phosphate decarboxylase cobd | HSERO_RS13235 | Not Available | Negative | 3017145 - 3018155 | 36610.6 |
| adenosylcobinamide-phosphate synthase cbib | HSERO_RS13240 | Not Available | Negative | 3018148 - 3019101 | 33944.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


