Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hdod domain-containing protein | HSERO_RS13145 | Not Available | Positive | 2996638 - 2997510 | 31308.6 |
| hypothetical protein | HSERO_RS13150 | Not Available | Positive | 2997520 - 2997756 | 8702.07 |
| fmdb family zinc ribbon protein | HSERO_RS13155 | Not Available | Negative | 2997766 - 2998062 | 10421.4 |
| formamidase | HSERO_RS13160 | Not Available | Negative | 2998165 - 2999343 | 42379.8 |
| aliphatic amidase | HSERO_RS13165 | Not Available | Negative | 2999536 - 3000567 | 38063.4 |
| urea abc transporter atp-binding subunit urte | HSERO_RS13170 | Not Available | Negative | 3000597 - 3001286 | 25143.8 |
| urea abc transporter atp-binding protein urtd | HSERO_RS13175 | Not Available | Negative | 3001312 - 3002079 | 28240.2 |
| urea abc transporter permease subunit urtc | HSERO_RS13180 | Not Available | Negative | 3002076 - 3003281 | 43286.1 |
| urea abc transporter permease subunit urtb | HSERO_RS13185 | Not Available | Negative | 3003325 - 3004242 | 32692.8 |
| urea abc transporter substrate-binding protein | HSERO_RS13190 | Not Available | Negative | 3004538 - 3005794 | 45504.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


