Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 glutamine amidotransferase domain-containing protein | HSERO_RS13095 | Not Available | Negative | 2985767 - 2986465 | 24489.2 |
| lysr family transcriptional regulator | HSERO_RS13100 | Not Available | Positive | 2986608 - 2987522 | 34215.3 |
| dicarboxylate/amino acid:cation symporter | HSERO_RS13105 | Not Available | Negative | 2987629 - 2988954 | 46728.6 |
| methyl-accepting chemotaxis protein | HSERO_RS13110 | Not Available | Positive | 2989234 - 2990820 | 57355.3 |
| gnat family n-acetyltransferase | HSERO_RS13115 | Not Available | Negative | 2990817 - 2991242 | 15152.2 |
| paai family thioesterase | HSERO_RS13120 | Not Available | Negative | 2991321 - 2991755 | 15766.1 |
| dabb family protein | HSERO_RS13125 | Not Available | Negative | 2991766 - 2992068 | 11159.5 |
| lysr substrate-binding domain-containing protein | HSERO_RS13130 | Not Available | Negative | 2992146 - 2993006 | 31785.2 |
| phosphonoacetaldehyde hydrolase | HSERO_RS13135 | Not Available | Positive | 2993144 - 2993977 | 29510.5 |
| duf3141 domain-containing protein | HSERO_RS13140 | Not Available | Negative | 2994001 - 2996499 | 91868.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


