Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase family protein | HSERO_RS13045 | Not Available | Negative | 2973178 - 2974059 | 31965.3 |
| phosphocholine-specific phospholipase c | HSERO_RS13050 | Not Available | Negative | 2974192 - 2976282 | 76731.5 |
| energy transducer tonb | HSERO_RS13055 | Not Available | Negative | 2976315 - 2977031 | 24588.9 |
| exbd/tolr family protein | HSERO_RS13060 | Not Available | Negative | 2977039 - 2977437 | 14505.1 |
| mota/tolq/exbb proton channel family protein | HSERO_RS13065 | Not Available | Negative | 2977434 - 2978159 | 25578.4 |
| tonb-dependent receptor | HSERO_RS13070 | Not Available | Negative | 2978235 - 2980979 | 98738.5 |
| laci family dna-binding transcriptional regulator | HSERO_RS13075 | Not Available | Positive | 2981463 - 2982572 | 40959.1 |
| extracellular solute-binding protein | HSERO_RS13080 | Not Available | Positive | 2982623 - 2983927 | 47785.2 |
| carbohydrate abc transporter permease | HSERO_RS13085 | Not Available | Positive | 2983939 - 2984823 | 31963.9 |
| abc transporter permease subunit | HSERO_RS13090 | Not Available | Positive | 2984817 - 2985713 | 32509.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


