Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tatd family hydrolase | HSERO_RS12995 | Not Available | Negative | 2962645 - 2963424 | 28779.1 |
| response regulator transcription factor | HSERO_RS13000 | Not Available | Negative | 2963484 - 2964032 | 19902.7 |
| atp-binding protein | HSERO_RS13005 | Not Available | Negative | 2964068 - 2965399 | 47697.0 |
| tonb-dependent receptor | HSERO_RS13010 | Not Available | Positive | 2965560 - 2967761 | 77563.5 |
| dna polymerase iii subunit delta' | HSERO_RS13015 | Not Available | Negative | 2967838 - 2968875 | 37885.4 |
| dtmp kinase | HSERO_RS13020 | Not Available | Negative | 2968886 - 2969494 | 22978.7 |
| endolytic transglycosylase mltg | HSERO_RS13025 | Not Available | Negative | 2969542 - 2970522 | 35834.1 |
| ygfz/gcvt domain-containing protein | HSERO_RS13030 | Not Available | Positive | 2970666 - 2971748 | 38360.8 |
| duf4936 family protein | HSERO_RS13035 | Not Available | Positive | 2971803 - 2972102 | 10741.9 |
| nrde family protein | HSERO_RS13040 | Not Available | Positive | 2972093 - 2972923 | 30660.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


