Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 2948473 - 2948559 | Not Available |
| calcium-binding protein | HSERO_RS25335 | Not Available | Positive | 2949024 - 2954933 | 204634.0 |
| sdr family oxidoreductase | HSERO_RS12955 | Not Available | Negative | 2955026 - 2955775 | 24897.1 |
| hypothetical protein | HSERO_RS12960 | Not Available | Positive | 2955951 - 2956235 | 10100.1 |
| squalene synthase hpnc | HSERO_RS12965 | Not Available | Positive | 2956270 - 2957079 | 30408.7 |
| hdod domain-containing protein | HSERO_RS12970 | Not Available | Negative | 2957115 - 2957954 | 30101.4 |
| presqualene diphosphate synthase hpnd | HSERO_RS12975 | Not Available | Positive | 2958342 - 2959175 | 31700.2 |
| hydroxysqualene dehydroxylase hpne | HSERO_RS12980 | Not Available | Positive | 2959191 - 2960522 | 47030.6 |
| alpha-hydroxy acid oxidase | HSERO_RS12985 | Not Available | Positive | 2960702 - 2961844 | 40919.9 |
| ankyrin repeat domain-containing protein | HSERO_RS12990 | Not Available | Negative | 2961977 - 2962648 | 24579.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


