Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spore coat u domain-containing protein | HSERO_RS12885 | Not Available | Positive | 2939130 - 2939630 | 16468.3 |
| Trna-asp | Not Available | Not Available | Positive | 2940107 - 2940183 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2940209 - 2940284 | Not Available |
| hu family dna-binding protein | HSERO_RS12900 | Not Available | Negative | 2940334 - 2940606 | 9233.41 |
| endopeptidase la | HSERO_RS12905 | Not Available | Negative | 2940893 - 2943301 | 88992.5 |
| atp-dependent clp protease atp-binding subunit clpx | HSERO_RS12910 | Not Available | Negative | 2943587 - 2944852 | 45804.4 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | HSERO_RS12915 | Not Available | Negative | 2945129 - 2945755 | 22650.6 |
| trigger factor | HSERO_RS12920 | Not Available | Negative | 2945807 - 2947156 | 49673.2 |
| crea family protein | HSERO_RS12925 | Not Available | Negative | 2947449 - 2947946 | 17754.6 |
| duf1653 domain-containing protein | HSERO_RS12930 | Not Available | Negative | 2948042 - 2948236 | 7641.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


