Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-dependent synthetase/ligase | HSERO_RS12835 | Not Available | Negative | 2926488 - 2928449 | 73140.8 |
| crp/fnr family transcriptional regulator | HSERO_RS12840 | Not Available | Positive | 2928740 - 2929396 | 24139.2 |
| response regulator | HSERO_RS12845 | Not Available | Negative | 2929550 - 2930005 | 17187.2 |
| response regulator | HSERO_RS12850 | Not Available | Negative | 2930274 - 2930924 | 24115.4 |
| atp-binding protein | HSERO_RS12855 | Not Available | Negative | 2930925 - 2932388 | 54383.1 |
| sensor histidine kinase | HSERO_RS12860 | Not Available | Negative | 2932385 - 2934217 | 69198.4 |
| spore coat u domain-containing protein | HSERO_RS12865 | Not Available | Positive | 2934735 - 2935208 | 15724.4 |
| molecular chaperone | HSERO_RS12870 | Not Available | Positive | 2935403 - 2936149 | 26575.2 |
| fimbria/pilus outer membrane usher protein | HSERO_RS12875 | Not Available | Positive | 2936146 - 2938440 | 81082.8 |
| spore coat u domain-containing protein | HSERO_RS12880 | Not Available | Positive | 2938466 - 2938936 | 16230.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


