Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family esterase | HSERO_RS12790 | Not Available | Positive | 2916063 - 2917172 | 38695.8 |
| hypothetical protein | HSERO_RS24795 | Not Available | Positive | 2917223 - 2917393 | 6274.28 |
| yxwgxw repeat-containing protein | HSERO_RS24400 | Not Available | Negative | 2917487 - 2917906 | 15357.2 |
| alanine transaminase | HSERO_RS12800 | Not Available | Negative | 2917995 - 2919290 | 47759.3 |
| phenylacetate--coa ligase family protein | HSERO_RS12805 | Not Available | Negative | 2919596 - 2920867 | 45378.6 |
| abc transporter atp-binding protein | HSERO_RS12810 | Not Available | Negative | 2920880 - 2921746 | 31783.6 |
| abc transporter substrate-binding protein | HSERO_RS12815 | Not Available | Negative | 2921808 - 2923139 | 47981.5 |
| branched-chain amino acid abc transporter permease | HSERO_RS12820 | Not Available | Negative | 2923227 - 2924303 | 38845.5 |
| branched-chain amino acid abc transporter permease | HSERO_RS12825 | Not Available | Negative | 2924537 - 2925451 | 32413.8 |
| abc transporter atp-binding protein | HSERO_RS12830 | Not Available | Negative | 2925527 - 2926408 | 32400.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


