Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s41 family peptidase | HSERO_RS00830 | Not Available | Positive | 171874 - 173370 | 54169.3 |
| hesa/moeb/thif family protein | HSERO_RS00835 | Not Available | Positive | 173459 - 174223 | 27346.9 |
| rna polymerase-binding protein dksa | HSERO_RS00840 | Not Available | Positive | 174653 - 175138 | 18453.1 |
| hypothetical protein | HSERO_RS00845 | Not Available | Positive | 175293 - 175721 | 15214.0 |
| tonb-dependent receptor | HSERO_RS00850 | Not Available | Positive | 175903 - 177975 | 73705.1 |
| carboxymuconolactone decarboxylase family protein | HSERO_RS00855 | Not Available | Negative | 178098 - 178631 | 18303.0 |
| arac family transcriptional regulator | HSERO_RS00860 | Not Available | Positive | 178794 - 179765 | 34147.3 |
| lrp/asnc ligand binding domain-containing protein | HSERO_RS00865 | Not Available | Negative | 179789 - 180253 | 17311.3 |
| branched-chain amino acid abc transporter substrate-binding protein | HSERO_RS00870 | Not Available | Positive | 180571 - 181707 | 40065.3 |
| trans-3-hydroxy-l-proline dehydratase | HSERO_RS00875 | Not Available | Positive | 181936 - 182946 | 36443.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


