Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate/nitrate reduction transcriptional regulator fnr | HSERO_RS12690 | Not Available | Positive | 2892167 - 2892934 | 28758.0 |
| phosphatase pap2 family protein | HSERO_RS12695 | Not Available | Positive | 2892990 - 2893763 | 28425.2 |
| diacylglycerol/lipid kinase family protein | HSERO_RS12700 | Not Available | Positive | 2893788 - 2894807 | 36758.3 |
| metallophosphoesterase family protein | HSERO_RS12705 | Not Available | Positive | 2894807 - 2895646 | 30672.8 |
| pepsy-associated tm helix domain-containing protein | HSERO_RS12710 | Not Available | Negative | 2895692 - 2897080 | 50511.1 |
| hypothetical protein | HSERO_RS12715 | Not Available | Negative | 2897295 - 2897519 | 8483.99 |
| zinc metallochaperone gtpase ziga | HSERO_RS12720 | Not Available | Positive | 2897704 - 2898918 | 45401.9 |
| gtp cyclohydrolase fole2 | HSERO_RS12725 | Not Available | Positive | 2898921 - 2899832 | 32338.6 |
| succinylglutamate desuccinylase/aspartoacylase domain-containing protein | HSERO_RS12730 | Not Available | Positive | 2899918 - 2900883 | 35758.6 |
| gnat family n-acetyltransferase | HSERO_RS12735 | Not Available | Negative | 2900896 - 2901381 | 17762.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


