Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine permease | HSERO_RS12590 | Not Available | Negative | 2871971 - 2873353 | 49184.9 |
| helix-turn-helix domain-containing protein | HSERO_RS12595 | Not Available | Positive | 2873546 - 2874544 | 36781.7 |
| hypothetical protein | HSERO_RS12600 | Not Available | Positive | 2874609 - 2875676 | 38870.6 |
| peptide transporter | HSERO_RS12605 | Not Available | Positive | 2875744 - 2877615 | 68938.4 |
| ykgj family cysteine cluster protein | HSERO_RS12610 | Not Available | Negative | 2877620 - 2878060 | 15639.6 |
| abc transporter substrate-binding protein | HSERO_RS12615 | Not Available | Negative | 2878136 - 2879161 | 36902.9 |
| abc transporter permease | HSERO_RS12620 | Not Available | Negative | 2879259 - 2880128 | 31707.4 |
| abc transporter atp-binding protein | HSERO_RS12625 | Not Available | Negative | 2880149 - 2880940 | 29224.2 |
| response regulator transcription factor | HSERO_RS12630 | Not Available | Positive | 2881114 - 2881833 | 26588.9 |
| sensor histidine kinase | HSERO_RS12635 | Not Available | Positive | 2881833 - 2883239 | 51653.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


