Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemerythrin domain-containing protein | HSERO_RS12540 | Not Available | Positive | 2861011 - 2861421 | 15686.8 |
| hypothetical protein | HSERO_RS12545 | Not Available | Positive | 2861598 - 2861954 | 13434.1 |
| 2-hydroxyacid dehydrogenase | HSERO_RS12550 | Not Available | Negative | 2861955 - 2862947 | 35176.2 |
| mfs transporter | HSERO_RS12555 | Not Available | Positive | 2863286 - 2864572 | 46526.8 |
| type ii toxin-antitoxin system mqsa family antitoxin | HSERO_RS12560 | Not Available | Negative | 2864673 - 2865074 | 14957.9 |
| type ii toxin-antitoxin system mqsr family toxin | HSERO_RS12565 | Not Available | Negative | 2865078 - 2865380 | 11105.7 |
| nadp-dependent isocitrate dehydrogenase | HSERO_RS12570 | Not Available | Positive | 2865719 - 2867947 | 81458.0 |
| ethanolamine ammonia-lyase subunit eutc | HSERO_RS12575 | Not Available | Negative | 2868243 - 2869112 | 31239.6 |
| ethanolamine ammonia-lyase subunit eutb | HSERO_RS12580 | Not Available | Negative | 2869109 - 2870515 | 50434.5 |
| had family hydrolase | HSERO_RS12585 | Not Available | Negative | 2870599 - 2871921 | 47930.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


