Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pcc domain-containing protein | HSERO_RS12345 | Not Available | Positive | 2803548 - 2804414 | 31355.6 |
| response regulator | HSERO_RS12350 | Not Available | Negative | 2804782 - 2805150 | 12967.0 |
| chemotaxis protein chex | HSERO_RS12355 | Not Available | Negative | 2805227 - 2806201 | 37049.2 |
| hypothetical protein | HSERO_RS12360 | Not Available | Negative | 2806241 - 2806870 | 22778.2 |
| methyl-accepting chemotaxis protein | HSERO_RS12365 | Not Available | Negative | 2806867 - 2807592 | 27037.6 |
| hamp domain-containing protein | HSERO_RS12370 | Not Available | Negative | 2807640 - 2810066 | 88833.2 |
| sdr family nad(p)-dependent oxidoreductase | HSERO_RS12375 | Not Available | Positive | 2810376 - 2811161 | 27624.7 |
| hypothetical protein | HSERO_RS25050 | Not Available | Positive | 2811179 - 2811346 | 5839.79 |
| vtt domain-containing protein | HSERO_RS12380 | Not Available | Positive | 2811402 - 2813711 | 84562.3 |
| endonuclease/exonuclease/phosphatase family protein | HSERO_RS12385 | Not Available | Positive | 2813711 - 2814493 | 28424.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


