Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | HSERO_RS00780 | Not Available | Positive | 164542 - 165189 | 23513.5 |
| gnat family n-acetyltransferase | HSERO_RS00785 | Not Available | Positive | 165253 - 165843 | 21792.1 |
| hypothetical protein | HSERO_RS00790 | Not Available | Positive | 166281 - 166535 | 9492.12 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | HSERO_RS00795 | Not Available | Negative | 166667 - 167671 | 34744.2 |
| sh3 domain-containing protein | HSERO_RS00800 | Not Available | Negative | 167684 - 168133 | 16039.4 |
| protein-export chaperone secb | HSERO_RS00805 | Not Available | Negative | 168251 - 168745 | 17912.3 |
| glutaredoxin 3 | HSERO_RS00810 | Not Available | Negative | 168798 - 169058 | 9586.81 |
| rhodanese-like domain-containing protein | HSERO_RS00815 | Not Available | Negative | 169055 - 169468 | 14848.3 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | HSERO_RS00820 | Not Available | Positive | 169619 - 170365 | 27727.0 |
| murein hydrolase activator envc family protein | HSERO_RS00825 | Not Available | Positive | 170458 - 171870 | 52284.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


