Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HSERO_RS12145 | Not Available | Negative | 2759300 - 2759617 | 11678.0 |
| pepsy-associated tm helix domain-containing protein | HSERO_RS12150 | Not Available | Positive | 2759898 - 2761205 | 48914.0 |
| fecr/pupr family sigma factor regulator | HSERO_RS12155 | Not Available | Negative | 2761139 - 2761348 | 7591.7 |
| fecr family protein | HSERO_RS12160 | Not Available | Negative | 2761439 - 2762467 | 37802.3 |
| sigma-70 family rna polymerase sigma factor | HSERO_RS12165 | Not Available | Negative | 2762491 - 2763015 | 19725.0 |
| response regulator transcription factor | HSERO_RS12170 | Not Available | Positive | 2763406 - 2764068 | 23942.1 |
| sensor histidine kinase | HSERO_RS12175 | Not Available | Positive | 2764065 - 2765384 | 47582.9 |
| cytochrome b | HSERO_RS12180 | Not Available | Positive | 2765483 - 2766052 | 21211.7 |
| methyl-accepting chemotaxis protein | HSERO_RS25330 | Not Available | Negative | 2766077 - 2767756 | 59595.6 |
| multidrug effflux mfs transporter | HSERO_RS12190 | Not Available | Positive | 2768066 - 2769319 | 44521.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


