Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inositol 2-dehydrogenase | HSERO_RS12095 | Not Available | Positive | 2747357 - 2748349 | 35304.0 |
| gfo/idh/moca family oxidoreductase | HSERO_RS12100 | Not Available | Positive | 2748346 - 2749371 | 37356.7 |
| murr/rpir family transcriptional regulator | HSERO_RS12105 | Not Available | Negative | 2749426 - 2750271 | 31542.8 |
| sugar abc transporter substrate-binding protein | HSERO_RS12110 | Not Available | Positive | 2750577 - 2751620 | 37432.7 |
| abc transporter permease | HSERO_RS12115 | Not Available | Positive | 2751737 - 2752876 | 40381.2 |
| atp-binding cassette domain-containing protein | HSERO_RS12120 | Not Available | Positive | 2752882 - 2753673 | 28707.4 |
| bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2- deoxyphosphogluconate aldolase | HSERO_RS12125 | Not Available | Positive | 2753684 - 2755657 | 72771.1 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | HSERO_RS12130 | Not Available | Positive | 2755654 - 2757531 | 67191.5 |
| myo-inosose-2 dehydratase | HSERO_RS12135 | Not Available | Positive | 2757592 - 2758512 | 33614.0 |
| 5-deoxy-glucuronate isomerase | HSERO_RS12140 | Not Available | Positive | 2758509 - 2759303 | 29426.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


