Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | HSERO_RS12045 | Not Available | Positive | 2737839 - 2738642 | 29861.1 |
| arac family transcriptional regulator | HSERO_RS12050 | Not Available | Negative | 2738696 - 2739610 | 33079.0 |
| sdr family oxidoreductase | HSERO_RS12055 | Not Available | Positive | 2739709 - 2740452 | 26103.2 |
| indoleacetamide hydrolase | HSERO_RS12060 | Not Available | Negative | 2740484 - 2741890 | 49710.5 |
| response regulator transcription factor | HSERO_RS12065 | Not Available | Positive | 2742526 - 2743293 | 29330.1 |
| torf family putative porin | HSERO_RS12070 | Not Available | Negative | 2743328 - 2743933 | 22402.2 |
| s8 family peptidase | HSERO_RS12075 | Not Available | Negative | 2744033 - 2745238 | 42780.3 |
| zf-hc2 domain-containing protein | HSERO_RS12080 | Not Available | Negative | 2745286 - 2745948 | 24012.1 |
| rna polymerase sigma factor | HSERO_RS12085 | Not Available | Negative | 2745958 - 2746518 | 21544.8 |
| hypothetical protein | HSERO_RS12090 | Not Available | Positive | 2746653 - 2747237 | 20604.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


