Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glxa family transcriptional regulator | HSERO_RS11895 | Not Available | Positive | 2709182 - 2710258 | 39801.5 |
| helix-turn-helix domain-containing protein | HSERO_RS11900 | Not Available | Positive | 2710670 - 2711488 | 31133.6 |
| amp-binding protein | HSERO_RS11905 | Not Available | Negative | 2711511 - 2714309 | 102187.0 |
| dna polymerase/3'-5' exonuclease polx | HSERO_RS11910 | Not Available | Positive | 2714506 - 2716320 | 66531.5 |
| heavy metal translocating p-type atpase | HSERO_RS11915 | Not Available | Negative | 2716302 - 2718587 | 81002.5 |
| abc transporter atp-binding protein | HSERO_RS11925 | Not Available | Positive | 2718997 - 2719719 | 26122.8 |
| hlyd family secretion protein | HSERO_RS11930 | Not Available | Positive | 2719716 - 2720804 | 39789.1 |
| efflux transporter outer membrane subunit | HSERO_RS11935 | Not Available | Positive | 2720825 - 2722270 | 51911.0 |
| abc transporter permease | HSERO_RS11940 | Not Available | Positive | 2722289 - 2723431 | 41233.9 |
| flavodoxin family protein | HSERO_RS11945 | Not Available | Negative | 2723460 - 2723942 | 17668.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


