Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-containing alcohol dehydrogenase | HSERO_RS00730 | Not Available | Positive | 151911 - 153050 | 39789.6 |
| aldehyde dehydrogenase (nadp(+)) | HSERO_RS00735 | Not Available | Positive | 153200 - 154789 | 55387.6 |
| abc transporter substrate-binding protein | HSERO_RS00740 | Not Available | Positive | 154919 - 156133 | 43565.1 |
| carboxymuconolactone decarboxylase family protein | HSERO_RS00745 | Not Available | Negative | 156281 - 156742 | 17386.7 |
| rna polymerase sigma factor sigj | HSERO_RS00750 | Not Available | Negative | 156854 - 157828 | 36491.6 |
| porphobilinogen synthase | HSERO_RS00755 | Not Available | Negative | 157855 - 158874 | 36981.6 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | HSERO_RS00760 | Not Available | Negative | 159166 - 159906 | 27003.9 |
| c-type cytochrome | HSERO_RS00765 | Not Available | Positive | 160111 - 160773 | 23179.5 |
| cytochrome c biogenesis protein resb | HSERO_RS00770 | Not Available | Positive | 161061 - 163211 | 79147.0 |
| c-type cytochrome biogenesis protein ccsb | HSERO_RS00775 | Not Available | Positive | 163332 - 164486 | 43063.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


