Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-ribosomal peptide synthetase | HSERO_RS24135 | Not Available | Positive | 2651343 - 2678825 | 993812.0 |
| alpha/beta hydrolase | HSERO_RS11740 | Not Available | Negative | 2679043 - 2679996 | 33995.5 |
| tonb-dependent siderophore receptor | HSERO_RS11745 | Not Available | Negative | 2680085 - 2682223 | 78520.0 |
| lysine n(6)-hydroxylase/l-ornithine n(5)-oxygenase family protein | HSERO_RS11750 | Not Available | Negative | 2682281 - 2683612 | 50252.4 |
| gnat family n-acetyltransferase | HSERO_RS11755 | Not Available | Negative | 2683634 - 2684638 | 38204.4 |
| siderophore-iron reductase fhuf | HSERO_RS11760 | Not Available | Negative | 2684744 - 2685478 | 26962.7 |
| cyclic peptide export abc transporter | HSERO_RS11765 | Not Available | Positive | 2685720 - 2687402 | 62188.6 |
| Tmrna,resume consensus sequence (at 324): gattgctgcgagagcaaa | Not Available | Not Available | Positive | 2687526 - 2688024 | Not Available |
| hypothetical protein | HSERO_RS24750 | Not Available | Positive | 2688744 - 2689346 | 22035.0 |
| hypothetical protein | HSERO_RS11770 | Not Available | Positive | 2689426 - 2690178 | 28755.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


