Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2306 domain-containing protein | HSERO_RS11530 | Not Available | Positive | 2606517 - 2606930 | 15175.2 |
| vit1/ccc1 transporter family protein | HSERO_RS11535 | Not Available | Negative | 2606946 - 2607641 | 23651.7 |
| sdr family oxidoreductase | HSERO_RS11540 | Not Available | Positive | 2607866 - 2608885 | 36190.6 |
| cina family protein | HSERO_RS11545 | Not Available | Negative | 2608892 - 2609389 | 17842.3 |
| c-type cytochrome | HSERO_RS11550 | Not Available | Negative | 2609597 - 2610418 | 29400.3 |
| c-type cytochrome | HSERO_RS11555 | Not Available | Negative | 2610415 - 2610789 | 13140.0 |
| cytochrome c oxidase assembly protein | HSERO_RS11560 | Not Available | Negative | 2610767 - 2611660 | 32962.6 |
| cytochrome c oxidase subunit 3 | HSERO_RS11565 | Not Available | Negative | 2611674 - 2612276 | 22323.1 |
| cytochrome c oxidase subunit i | HSERO_RS11570 | Not Available | Negative | 2612279 - 2614180 | 70527.7 |
| c-type cytochrome | HSERO_RS11575 | Not Available | Negative | 2614177 - 2615202 | 36347.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


