Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | HSERO_RS11480 | Not Available | Positive | 2592822 - 2593766 | 33214.5 |
| sugar abc transporter atp-binding protein | HSERO_RS11485 | Not Available | Positive | 2593858 - 2595426 | 56146.2 |
| abc transporter permease | HSERO_RS11490 | Not Available | Positive | 2595478 - 2596464 | 34209.9 |
| laci family dna-binding transcriptional regulator | HSERO_RS11495 | Not Available | Positive | 2596476 - 2597489 | 36384.5 |
| ribokinase | HSERO_RS11500 | Not Available | Positive | 2597506 - 2598405 | 31370.2 |
| d-ribose pyranase | HSERO_RS11505 | Not Available | Positive | 2598427 - 2598819 | 13687.8 |
| methyl-accepting chemotaxis protein | HSERO_RS11510 | Not Available | Positive | 2599049 - 2600794 | 61322.2 |
| asma family protein | HSERO_RS11515 | Not Available | Positive | 2600949 - 2602880 | 69256.7 |
| esterase | HSERO_RS11520 | Not Available | Positive | 2602926 - 2603987 | 38449.1 |
| hybrid sensor histidine kinase/response regulator | HSERO_RS11525 | Not Available | Positive | 2604274 - 2606340 | 74868.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


