Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | HSERO_RS11430 | Not Available | Negative | 2583581 - 2584312 | 27117.4 |
| iclr family transcriptional regulator | HSERO_RS11435 | Not Available | Positive | 2584564 - 2585301 | 26853.6 |
| glutamine abc transporter substrate-binding protein | HSERO_RS11440 | Not Available | Positive | 2585462 - 2586217 | 27628.5 |
| amino acid abc transporter permease | HSERO_RS11445 | Not Available | Positive | 2586315 - 2586980 | 24327.8 |
| amino acid abc transporter atp-binding protein | HSERO_RS11450 | Not Available | Positive | 2586980 - 2587753 | 27354.8 |
| formimidoylglutamate deiminase | HSERO_RS11455 | Not Available | Positive | 2587827 - 2589275 | 52266.4 |
| universal stress protein | HSERO_RS11460 | Not Available | Positive | 2589571 - 2590008 | 15376.9 |
| na+/h+ antiporter nhaa | HSERO_RS11465 | Not Available | Positive | 2590245 - 2591438 | 41038.5 |
| hypothetical protein | HSERO_RS11470 | Not Available | Positive | 2591747 - 2592040 | 10608.8 |
| hypothetical protein | HSERO_RS11475 | Not Available | Positive | 2592123 - 2592302 | 6965.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


