Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HSERO_RS11330 | Not Available | Positive | 2558707 - 2558949 | 9211.22 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | HSERO_RS11335 | Not Available | Negative | 2559356 - 2559898 | 19623.0 |
| hypothetical protein | HSERO_RS11340 | Not Available | Negative | 2559970 - 2560194 | 8354.38 |
| hypothetical protein | HSERO_RS25205 | Not Available | Negative | 2560353 - 2560691 | 12251.0 |
| thiamine pyrophosphate-binding protein | HSERO_RS11350 | Not Available | Negative | 2560695 - 2562389 | 60042.0 |
| ku protein | HSERO_RS11355 | Not Available | Positive | 2562602 - 2563651 | 38802.4 |
| dna ligase d | HSERO_RS11360 | Not Available | Positive | 2563648 - 2566218 | 94787.0 |
| nucleotide excision repair endonuclease | HSERO_RS11365 | Not Available | Positive | 2566388 - 2567500 | 41036.8 |
| hypothetical protein | HSERO_RS11370 | Not Available | Positive | 2567526 - 2568887 | 48410.9 |
| alpha/beta hydrolase family protein | HSERO_RS11375 | Not Available | Negative | 2568938 - 2569927 | 34952.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


