Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | HSERO_RS11280 | Not Available | Negative | 2547431 - 2550639 | 117732.0 |
| y-family dna polymerase | HSERO_RS11285 | Not Available | Negative | 2550649 - 2552133 | 55390.0 |
| translesion dna synthesis-associated protein imua | HSERO_RS11290 | Not Available | Negative | 2552060 - 2552806 | 26572.5 |
| kgg domain-containing protein | HSERO_RS11295 | Not Available | Positive | 2553141 - 2553485 | 11700.2 |
| fic family protein | HSERO_RS11300 | Not Available | Negative | 2553706 - 2555211 | 56697.4 |
| yoak family protein | HSERO_RS11305 | Not Available | Negative | 2555311 - 2556063 | 26692.4 |
| hypothetical protein | HSERO_RS11310 | Not Available | Positive | 2556286 - 2556522 | 8108.54 |
| cbs domain-containing protein | HSERO_RS11315 | Not Available | Negative | 2556822 - 2557334 | 18566.3 |
| semisweet family transporter | HSERO_RS11320 | Not Available | Positive | 2557583 - 2557855 | 10130.3 |
| duf4142 domain-containing protein | HSERO_RS11325 | Not Available | Positive | 2558014 - 2558586 | 20440.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


