Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l36 | HSERO_RS00680 | Not Available | Positive | 144199 - 144312 | 4333.6 |
| 30s ribosomal protein s13 | HSERO_RS00685 | Not Available | Positive | 144341 - 144706 | 13638.8 |
| 30s ribosomal protein s11 | HSERO_RS00690 | Not Available | Positive | 144749 - 145153 | 14159.1 |
| 30s ribosomal protein s4 | HSERO_RS00695 | Not Available | Positive | 145316 - 145939 | 23231.8 |
| dna-directed rna polymerase subunit alpha | HSERO_RS00700 | Not Available | Positive | 146046 - 147023 | 35710.1 |
| 50s ribosomal protein l17 | HSERO_RS00705 | Not Available | Positive | 147211 - 147606 | 14916.3 |
| divalent-cation tolerance protein cuta | HSERO_RS00710 | Not Available | Positive | 147754 - 148101 | 12744.5 |
| protein-disulfide reductase dsbd | HSERO_RS00715 | Not Available | Positive | 148140 - 149942 | 63570.0 |
| peroxiredoxin | HSERO_RS00720 | Not Available | Positive | 150054 - 150692 | 23813.5 |
| lysr family transcriptional regulator | HSERO_RS00725 | Not Available | Negative | 150765 - 151709 | 34941.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


