Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | HSERO_RS11230 | Not Available | Positive | 2536996 - 2538204 | 42608.1 |
| abc transporter atp-binding protein | HSERO_RS11235 | Not Available | Positive | 2538201 - 2538959 | 27383.2 |
| abc transporter atp-binding protein | HSERO_RS11240 | Not Available | Positive | 2538952 - 2539668 | 25640.4 |
| hypothetical protein | HSERO_RS11245 | Not Available | Positive | 2539760 - 2540044 | 10668.0 |
| mfs transporter | HSERO_RS11250 | Not Available | Negative | 2540099 - 2541406 | 47407.8 |
| sdr family oxidoreductase | HSERO_RS11255 | Not Available | Negative | 2541578 - 2542336 | 26678.1 |
| aldehyde dehydrogenase family protein | HSERO_RS11260 | Not Available | Negative | 2542476 - 2543909 | 50937.9 |
| fadr/gntr family transcriptional regulator | HSERO_RS11265 | Not Available | Positive | 2544205 - 2544981 | 28890.8 |
| lysr substrate-binding domain-containing protein | HSERO_RS11270 | Not Available | Positive | 2545059 - 2546000 | 33762.1 |
| ggdef domain-containing protein | HSERO_RS11275 | Not Available | Positive | 2546235 - 2547422 | 43803.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


