Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate oxidase | HSERO_RS11085 | Not Available | Negative | 2500544 - 2502148 | 58420.6 |
| formate-dependent phosphoribosylglycinamide formyltransferase | HSERO_RS11090 | Not Available | Negative | 2502315 - 2503526 | 43275.2 |
| fita-like ribbon-helix-helix domain-containing protein | HSERO_RS11095 | Not Available | Positive | 2503899 - 2504153 | 9289.13 |
| type ii toxin-antitoxin system vapc family toxin | HSERO_RS11100 | Not Available | Positive | 2504150 - 2504566 | 14946.0 |
| hypothetical protein | HSERO_RS11105 | Not Available | Negative | 2504591 - 2504893 | 10866.2 |
| acyclic terpene utilization atua family protein | HSERO_RS11110 | Not Available | Negative | 2504895 - 2506250 | 47337.5 |
| citmhs family transporter | HSERO_RS11115 | Not Available | Negative | 2506293 - 2507594 | 46029.7 |
| lysr family transcriptional regulator | HSERO_RS11120 | Not Available | Positive | 2507779 - 2508786 | 36471.3 |
| mfs transporter | HSERO_RS11125 | Not Available | Negative | 2508800 - 2510461 | 59658.6 |
| tigr03364 family fad-dependent oxidoreductase | HSERO_RS11130 | Not Available | Negative | 2510904 - 2512106 | 43538.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


