Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-carboxy-7-deazaguanine synthase | HSERO_RS11035 | Not Available | Positive | 2489633 - 2490268 | 23373.1 |
| 6-carboxytetrahydropterin synthase qued | HSERO_RS11040 | Not Available | Positive | 2490362 - 2490808 | 16663.0 |
| trna adenosine(34) deaminase tada | HSERO_RS11045 | Not Available | Positive | 2490808 - 2491365 | 19561.6 |
| muramoyltetrapeptide carboxypeptidase | HSERO_RS11050 | Not Available | Positive | 2491362 - 2492366 | 36061.5 |
| duf1439 domain-containing protein | HSERO_RS11055 | Not Available | Negative | 2492388 - 2492960 | 21143.5 |
| abc-f family atpase | HSERO_RS11060 | Not Available | Positive | 2493205 - 2494803 | 58969.4 |
| quinolinate synthase nada | HSERO_RS11065 | Not Available | Positive | 2494841 - 2495980 | 40847.0 |
| carboxylating nicotinate-nucleotide diphosphorylase | HSERO_RS11070 | Not Available | Positive | 2495977 - 2496882 | 31950.5 |
| mase1 domain-containing protein | HSERO_RS11075 | Not Available | Positive | 2497003 - 2498253 | 44540.0 |
| patatin-like phospholipase family protein | HSERO_RS11080 | Not Available | Negative | 2498263 - 2500539 | 81986.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


