Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | HSERO_RS10990 | Not Available | Negative | 2478391 - 2479080 | 25460.7 |
| tetratricopeptide repeat protein | HSERO_RS10995 | Not Available | Positive | 2479398 - 2480984 | 57741.6 |
| ssra-binding protein smpb | HSERO_RS11000 | Not Available | Negative | 2481037 - 2481486 | 17212.9 |
| type ii toxin-antitoxin system rata family toxin | HSERO_RS11005 | Not Available | Positive | 2481554 - 2481985 | 16494.7 |
| rnfh family protein | HSERO_RS11010 | Not Available | Positive | 2481978 - 2482283 | 11264.8 |
| imp dehydrogenase | HSERO_RS11015 | Not Available | Positive | 2482414 - 2483883 | 52182.0 |
| glutamine-hydrolyzing gmp synthase | HSERO_RS11020 | Not Available | Positive | 2483997 - 2485589 | 58348.2 |
| acyltransferase family protein | HSERO_RS24380 | Not Available | Negative | 2485783 - 2487825 | 76983.3 |
| cupin domain-containing protein | HSERO_RS11025 | Not Available | Negative | 2488035 - 2488439 | 15054.5 |
| duf72 domain-containing protein | HSERO_RS11030 | Not Available | Positive | 2488575 - 2489489 | 35275.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


