Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hii | HSERO_RS10945 | Not Available | Positive | 2468428 - 2469060 | 22405.3 |
| trmh family rna methyltransferase | HSERO_RS10950 | Not Available | Positive | 2469071 - 2469862 | 27500.2 |
| duf6314 family protein | HSERO_RS10955 | Not Available | Positive | 2469873 - 2470373 | 18614.9 |
| pyruvate, water dikinase regulatory protein | HSERO_RS10960 | Not Available | Negative | 2470381 - 2471235 | 32082.5 |
| hypothetical protein | HSERO_RS24735 | Not Available | Negative | 2471244 - 2471549 | 11685.4 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | HSERO_RS10965 | Not Available | Positive | 2471608 - 2473963 | 85274.7 |
| nfed family protein | HSERO_RS10970 | Not Available | Positive | 2474107 - 2474541 | 15520.0 |
| spfh domain-containing protein | HSERO_RS10975 | Not Available | Positive | 2474597 - 2475508 | 32965.9 |
| serine hydrolase domain-containing protein | HSERO_RS10980 | Not Available | Positive | 2475515 - 2476870 | 48272.6 |
| atp-binding protein | HSERO_RS10985 | Not Available | Negative | 2476968 - 2478389 | 52689.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


