Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyprenyl diphosphate synthase | HSERO_RS10895 | Not Available | Positive | 2457269 - 2458027 | 28316.0 |
| phosphatidate cytidylyltransferase | HSERO_RS10900 | Not Available | Positive | 2458027 - 2458854 | 29835.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | HSERO_RS10905 | Not Available | Positive | 2458890 - 2460062 | 41097.7 |
| rip metalloprotease rsep | HSERO_RS10910 | Not Available | Positive | 2460059 - 2461432 | 49355.8 |
| outer membrane protein assembly factor bama | HSERO_RS10915 | Not Available | Positive | 2461588 - 2463963 | 87658.5 |
| omph family outer membrane protein | HSERO_RS10920 | Not Available | Positive | 2464009 - 2464518 | 19395.1 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | HSERO_RS10925 | Not Available | Positive | 2464654 - 2465742 | 37984.4 |
| 3-hydroxyacyl-acp dehydratase fabz | HSERO_RS10930 | Not Available | Positive | 2465735 - 2466199 | 17290.9 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | HSERO_RS10935 | Not Available | Positive | 2466412 - 2467200 | 28277.7 |
| lipid-a-disaccharide synthase | HSERO_RS10940 | Not Available | Positive | 2467184 - 2468359 | 43649.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


