Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanophycin synthetase | HSERO_RS10845 | Not Available | Negative | 2443181 - 2445379 | 79222.8 |
| abc transporter atp-binding protein | HSERO_RS10850 | Not Available | Positive | 2446051 - 2448327 | 84179.9 |
| duf1854 domain-containing protein | HSERO_RS10855 | Not Available | Positive | 2448332 - 2448817 | 17915.4 |
| pseudouridine synthase | HSERO_RS10860 | Not Available | Negative | 2448891 - 2449637 | 28260.6 |
| [protein-pii] uridylyltransferase | HSERO_RS10865 | Not Available | Negative | 2449742 - 2452294 | 96969.7 |
| type i methionyl aminopeptidase | HSERO_RS10870 | Not Available | Negative | 2452446 - 2453270 | 30023.3 |
| 30s ribosomal protein s2 | HSERO_RS10875 | Not Available | Positive | 2453622 - 2454362 | 27041.8 |
| translation elongation factor ts | HSERO_RS10880 | Not Available | Positive | 2454500 - 2455387 | 31435.8 |
| ump kinase | HSERO_RS10885 | Not Available | Positive | 2455689 - 2456405 | 25213.8 |
| ribosome recycling factor | HSERO_RS10890 | Not Available | Positive | 2456522 - 2457082 | 20755.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


